Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCCGAGGGGAGGCCAGCGA
(.((((((((((((.((.(...&).)))))))))).)))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001350870
GeneSymbolSNX13
Binding site39,59
Score0.923
Seed1
Au0.265
Energy-21.4
Binding len20
Me-5.837
Phylopstem0.3686736307692308
Phylopflank0.06402872588636366
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end3
Position5UTR
2D Structure