Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCTTAGAAGAAATGAAACGGGAAGCCAGG
..((((((((((((((((((..&)))))))))..........)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001350870
GeneSymbolSNX13
Binding site427,457
Score0.846
Seed1
Au0.588
Energy-21.4
Binding len30
Me-4.957
Phylopstem0.24538376551724145
Phylopflank0.14720492650000003
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end6
PositionCDS
2D Structure