Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGGACGAGATGTGGAAATGGAAGAAATGATTGAGCAGCTGCAAG
((((((((((((((((.....&.))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330538
GeneSymbolRPGRIP1L
Binding site366,413
Score0.923
Seed1
Au0.632
Energy-19.3
Binding len20
Me-3.938
Phylopstem0.8417688333333334
Phylopflank0.212698035
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure