Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACACGCTGCAGCTGCT
..((((((((((((((.(((.&))).))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199341
GeneSymbolZSWIM9
Binding site2665,2685
Score0.923
Seed1
Au0.338
Energy-26.9
Binding len20
Me-4.957
Phylopstem1.29208842
Phylopflank0.9975773271250001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure