Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAGGGGGGCGCAGCTGCAC
.((((((((((.((...(((.&)))......)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199341
GeneSymbolZSWIM9
Binding site1920,1943
Score0.846
Seed1
Au0.368
Energy-23.5
Binding len23
Me-8.109
Phylopstem-0.2872454400000001
Phylopflank-0.16249143875000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure