Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGGAATTACTCGCAGCTGG
...(((((((((((.((((((&)))))).)))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350870
GeneSymbolSNX13
Binding site3253,3276
Score1.0
Seed0
Au0.588
Energy-20.4
Binding len23
Me-7.25
Phylopstem-0.08764310000000004
Phylopflank0.32818238875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure