Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACAATCCTGGTGGAGGGCGAAAGGCACGTCTTACATGGCAGCAGGCAAA
((((.(((((.(.(((((((.&.)))))))).)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199352
GeneSymbolSLC22A25
Binding site4951,5005
Score1.0
Seed0
Au0.529
Energy-21.7
Binding len22
Me-12.171
Phylopstem0.3571134285714286
Phylopflank-0.08003170625
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure