Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACCAGCCACATGGAGCTGTGAG
((((((((.((((((..((((&))))...)))))....).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199352
GeneSymbolSLC22A25
Binding site5533,5560
Score0.846
Seed1
Au0.603
Energy-19.8
Binding len27
Me-5.227
Phylopstem0.152543325
Phylopflank-0.154956594125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure