Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATCACAGCCGCAGCTCTGTTCAGCGGA
((((((((((((((((...((&))...)))))))))))).......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199360
GeneSymbolTPD52L2
Binding site833,862
Score0.923
Seed1
Au0.324
Energy-22.7
Binding len29
Me-3.938
Phylopstem1.2010512608695652
Phylopflank0.9240286337499999
Longest consecutive pairings12
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure