Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGCTTGCCAGGC
.(((((((.....(((((....&)))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_199415
GeneSymbolUBOX5
Binding site2201,2217
Score0.846
Seed1
Au0.441
Energy-18.8
Binding len16
Me-13.553
Phylopstem3.8551758571428567
Phylopflank2.484705742875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure