Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGAGCTGAGGGGG
...((((.(((((((((((..&))))))).)))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_199415
GeneSymbolUBOX5
Binding site1637,1655
Score0.846
Seed0
Au0.338
Energy-26.1
Binding len18
Me-8.828
Phylopstem3.250255375
Phylopflank2.6954055937500003
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure