Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCAGCGGCCGGTTGCT
..((((((((.((((..((((&))))..)))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199415
GeneSymbolUBOX5
Binding site1554,1575
Score0.923
Seed1
Au0.338
Energy-21.4
Binding len21
Me-8.015
Phylopstem4.209465499999999
Phylopflank3.0593049837500006
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure