Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGCTTAGCCGCGGGTCCCTGTGAA
((((((((((((((((((((.&)))))....)))))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199415
GeneSymbolUBOX5
Binding site2645,2674
Score0.923
Seed1
Au0.456
Energy-20.3
Binding len29
Me-3.938
Phylopstem2.2590046428571435
Phylopflank2.9049229
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure