Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGAACTGAATTCCATGGGTT&AGCCTGTGGCTAGATTTATTGATTTGGTGATCAA
(((..(((((((((((((((((&)))))))))...........))))))))..))).
Details
MiRNAhsa-miR-146a-5p
RefseqIDNM_199421
GeneSymbolSOCS4
Binding site4968,5002
Score0.808
Seed0
Au0.618
Energy-17.8
Binding len34
Me-11.089
Phylopstem0.2219483785714286
Phylopflank0.25744095749999996
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end8
Position3UTR
2D Structure