Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGGAGGCCGAGCTGCC
..((((((.(((((...((((&))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199425
GeneSymbolVSX1
Binding site157,176
Score0.923
Seed1
Au0.265
Energy-20.4
Binding len19
Me-6.982
Phylopstem0.202055
Phylopflank0.006036408750000027
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure