Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGCAGCCTCAGCACATACAGCTGCAAG
(((((((((.((((((.((((&))))...))))))..........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199437
GeneSymbolPRDM10
Binding site3023,3056
Score0.846
Seed1
Au0.382
Energy-23.5
Binding len33
Me-5.18
Phylopstem0.8113037777777777
Phylopflank1.41480705625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure