Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGCAGCCTCAGCACATACAGCTGCAAG
(((((((((.((((((.((((&))))...))))))..........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199439
GeneSymbolPRDM10
Binding site2711,2744
Score0.923
Seed1
Au0.397
Energy-23.5
Binding len33
Me-5.18
Phylopstem1.9740351111111112
Phylopflank2.409303803125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure