Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAATGGCTCCAGGAACAGCTGTGAA
((((((((((.(((((.((((&))))))))).)).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199443
GeneSymbolUSP4
Binding site1829,1859
Score0.846
Seed1
Au0.456
Energy-20.4
Binding len30
Me-6.762
Phylopstem1.2752272736842107
Phylopflank0.05079295374999998
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure