Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCTGTGGGTGCCGGGTG
(((((((((.((..(.((((..&)))))..)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_199454
GeneSymbolPRDM16
Binding site5784,5804
Score0.923
Seed1
Au0.412
Energy-19.7
Binding len20
Me-7.559
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure