Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCATTAAGGACATTGAGCCAGGTG
(((((((...((((((......&.)))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_199454
GeneSymbolPRDM16
Binding site640,667
Score1.0
Seed1
Au0.529
Energy-19.2
Binding len16
Me-8.55
Phylopstem1.2670141428571429
Phylopflank1.3911517987499997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure