Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCAGCAACAGCAGCCAGGGCACGACGGCAGCTGCGGG
((((((((((.(((((..(((&.))).....))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199454
GeneSymbolPRDM16
Binding site1737,1778
Score0.846
Seed1
Au0.294
Energy-26.2
Binding len26
Me-6.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure