Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGCAACCGCTGCTTCGGGCAGC
(((((((.(((((((((((((&)))).))))))))).)))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199454
GeneSymbolPRDM16
Binding site3088,3115
Score0.846
Seed1
Au0.397
Energy-25.0
Binding len27
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure