Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCGCGTGCTGCGC
.(((((((((((....(((((&)))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199460
GeneSymbolCACNA1C
Binding site1287,1305
Score0.923
Seed1
Au0.324
Energy-21.5
Binding len18
Me-6.908
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure