Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGGAGCAGCAGTTGCT
..((((((((.(((.(.((((&))))..).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199478
GeneSymbolPLP1
Binding site1727,1748
Score0.846
Seed1
Au0.471
Energy-21.4
Binding len21
Me-8.517
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure