Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAGACTCAGCCAGTTTCCTCTGCAGCTGCT
..(((((((((((((((((((&))))))....)))))..........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199511
GeneSymbolCCDC80
Binding site3694,3728
Score0.923
Seed1
Au0.529
Energy-24.5
Binding len34
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure