Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTGAAAGCTGGAGCTGCAGC
((((((((.(((((...((((&)).))...))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_199511
GeneSymbolCCDC80
Binding site655,678
Score1.0
Seed1
Au0.441
Energy-21.6
Binding len23
Me-5.962
Phylopstem0.12282539999999997
Phylopflank0.3025645250000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure