Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTTGCCTTTTTTAGCTGCAAG
(((((((((.(((...(((((&)))))..))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201224
GeneSymbolDDX47
Binding site1506,1531
Score0.923
Seed1
Au0.544
Energy-18.6
Binding len25
Me-7.005
Phylopstem0.1711654888888889
Phylopflank0.25405214750000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure