Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACAACCAGGAGCTGAACAACCGCCTGGCTGCAGA
((((((((((((((((..(((&.)))..))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201274
GeneSymbolMPRIP
Binding site2969,3007
Score0.885
Seed1
Au0.382
Energy-28.2
Binding len25
Me-3.938
Phylopstem3.558779866666667
Phylopflank2.7836272575
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure