Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGACTGCAGAAAATTGACAATGCCTGCC
..((((((((((((((.....&))))))))))..............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201280
GeneSymbolBLOC1S5
Binding site2133,2162
Score0.923
Seed1
Au0.544
Energy-17.7
Binding len29
Me-4.957
Phylopstem4.203199821428571
Phylopflank4.393880837500001
Longest consecutive pairings10
Position of longest consecutive pairings19
Pairings in 3prime end3
Position3UTR
2D Structure