Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGTGCTGTAAC
(((((((.((((((((.....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201414
GeneSymbolAPP
Binding site2365,2381
Score0.923
Seed1
Au0.618
Energy-19.1
Binding len16
Me-6.251
Phylopstem5.879495374999999
Phylopflank4.888063496250002
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure