Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGATGACTGCAGCCCTGTC
..(((((((((((((((((((&)))))...)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201431
GeneSymbolRASSF6
Binding site5347,5372
Score1.0
Seed1
Au0.515
Energy-20.4
Binding len25
Me-4.957
Phylopstem1.1962933208333335
Phylopflank2.34569734125
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure