Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCGAGAAACAACGGAAGGAGCTGCAGTTGCT
..((((((((((((.(.....&.).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201435
GeneSymbolCCDC62
Binding site165,197
Score1.0
Seed1
Au0.588
Energy-21.1
Binding len16
Me-5.692
Phylopstem1.1617853533333333
Phylopflank0.80297074025
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure