Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCGGCCGCGCTGG
...((((.(((((((..((((&)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350932
GeneSymbolHIGD2B
Binding site220,237
Score0.923
Seed0
Au0.324
Energy-21.1
Binding len17
Me-9.061
Phylopstem-0.08659839999999999
Phylopflank0.2609363725000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure