Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGGCGGCGAGCGGACGGCTGCAT
.((((((((((.((((.....&.)))).))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201515
GeneSymbolPPHLN1
Binding site10,34
Score0.846
Seed1
Au0.317
Energy-19.6
Binding len19
Me-7.14
Phylopstem0.18594263083333332
Phylopflank-0.2723681866666667
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure