Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCTGAGGCTGCAAGCAAGTGGGCTGCT
..(((((((((((((((((..&)))))...))))))).........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201515
GeneSymbolPPHLN1
Binding site810,840
Score0.846
Seed1
Au0.559
Energy-18.9
Binding len30
Me-4.957
Phylopstem3.3344572068965515
Phylopflank2.6946689475
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure