Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTAACCCTACAGACACTAATGCCTTGGTGGCAGCTGTT
..((((((((.....((((((&.))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201542
GeneSymbolMED8
Binding site549,591
Score0.846
Seed1
Au0.544
Energy-20.9
Binding len19
Me-14.01
Phylopstem-0.31135352625
Phylopflank0.539166981375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure