Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCTGCACCAACACTGTCCAGGGACACAGCTGCACCTGCAAA
((((((.(((((((((.....&.))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201551
GeneSymbolNELL1
Binding site1643,1688
Score0.923
Seed0
Au0.382
Energy-22.3
Binding len18
Me-5.481
Phylopstem6.234811333333334
Phylopflank4.859797838249999
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure