Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTCCGTGCTGCC
..(((((.((((..(.(((((&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201566
GeneSymbolSLC16A13
Binding site1340,1357
Score0.846
Seed0
Au0.456
Energy-19.0
Binding len17
Me-9.65
Phylopstem2.1976292
Phylopflank3.8645423725
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure