Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCATTGCAACCTCCTGTAATGCAGCAGCAGC
((((.((((((((((((((((&)))....)))))))).........))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201568
GeneSymbolSMG7
Binding site2479,2514
Score0.923
Seed0
Au0.544
Energy-21.4
Binding len35
Me-8.057
Phylopstem0.7041798931034483
Phylopflank1.1038420324999998
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure