Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGACCCCGAGAAGCCCAGCCGCAGCTACAGCGAG
(((((((((((((((...(((&.))))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201574
GeneSymbolSLC4A3
Binding site314,353
Score0.942
Seed1
Au0.353
Energy-25.0
Binding len23
Me-4.171
Phylopstem0.8072097333333332
Phylopflank0.8978304787500001
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure