Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTATGGCTGCAGTCCTCCGGTTGCAT
.((((((((((((((((((((&))))..))))))))))))........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201596
GeneSymbolCACNB2
Binding site2498,2529
Score0.923
Seed1
Au0.544
Energy-20.7
Binding len31
Me-3.793
Phylopstem1.55752794
Phylopflank1.8321583700000004
Longest consecutive pairings12
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure