Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCAGTGTATGTTGGA
..((((((((((.((((((...&)))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001350953
GeneSymbolLMBR1
Binding site2275,2293
Score0.846
Seed1
Au0.662
Energy-16.7
Binding len18
Me-6.246
Phylopstem0.48229488
Phylopflank0.05902536375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure