Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCGGAGGTGCGGCTGCAGG
(((((((((((.(((((((.(&).))))))..).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201626
GeneSymbolUSP33
Binding site141,165
Score0.846
Seed1
Au0.338
Energy-23.9
Binding len24
Me-7.284
Phylopstem-0.4236760818181818
Phylopflank0.22310577250000024
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure