Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAACCTGCAGCTGG
...((((((((((((...(((&))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201627
GeneSymbolTRIM41
Binding site1305,1323
Score0.846
Seed0
Au0.382
Energy-22.6
Binding len18
Me-6.748
Phylopstem3.0606233846153845
Phylopflank4.0065530124999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure