Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCTGAACAGCCATGGGGGGCGCAGCCGCAGCTGGGAG
((.(((((((((((((.....&.))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201629
GeneSymbolTJP2
Binding site793,834
Score1.0
Seed0
Au0.279
Energy-27.8
Binding len18
Me-5.495
Phylopstem2.122741461538461
Phylopflank2.41186211
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end3
PositionCDS
2D Structure