Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCCCGGGCTGAGCTGCGC
.(((((((.(((((....((.&))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350962
GeneSymbolIMMP2L
Binding site5,24
Score0.846
Seed1
Au0.321
Energy-17.6
Binding len19
Me-5.818
Phylopstem-0.2675119
Phylopflank-0.1797300166666667
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure