Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGCTTCAGCTGCGGT
(((((((((.(((..((((((&))))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350965
GeneSymbolDCLRE1C
Binding site33,53
Score0.846
Seed1
Au0.279
Energy-22.0
Binding len20
Me-6.772
Phylopstem0.06387377777777782
Phylopflank-0.07180567954545457
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position5UTR
2D Structure