Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAACTGCAGATAGAAGACCTGACTCGTAAACTGCGC
.((((((((((((((((....&))))))))))).....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201998
GeneSymbolSF1
Binding site310,348
Score0.923
Seed1
Au0.426
Energy-19.5
Binding len38
Me-3.793
Phylopstem-0.001701259459459448
Phylopflank0.61594788375
Longest consecutive pairings11
Position of longest consecutive pairings27
Pairings in 3prime end4
PositionCDS
2D Structure