Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGCAGCCTGCCAAAATTATTACCATCCCAGCTACACAGCTTGCAC
.((((((((((((((((.(((&))).))))))).))..........................)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_201999
GeneSymbolELF2
Binding site1823,1872
Score0.885
Seed1
Au0.559
Energy-18.9
Binding len49
Me-3.793
Phylopstem5.298908236363638
Phylopflank5.265352695000001
Longest consecutive pairings7
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure