Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGGCCAGAGCAGGGCAT
.(((..(((((((((.(((((&))))))))))...)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_203282
GeneSymbolZNF254
Binding site398,420
Score0.846
Seed0
Au0.574
Energy-16.5
Binding len22
Me-10.046
Phylopstem3.32216435
Phylopflank2.6568414875000004
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure